PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004501478.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 408aa    MW: 45911.6 Da    PI: 4.9864
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004501478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-10224266754
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++ErrRR+++ +++  Lr+++Pk      +K++ a+iL  A++Y+k+L
  XP_004501478.1 224 MAERRRRKKLSDRLYMLRSIVPKI-----TKMDRASILGDAIDYMKEL 266
                     78*********************7.....7****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.53E-12215270No hitNo description
PROSITE profilePS5088815.478217266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.37E-16220286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.7E-13223272IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-8224266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.0E-15224278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS516719.17336408IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MERDMVPWLE PQIEEEEETT EAKWSTRSNG NNNGDEHLTS LNSILEAEWY MNNIPPHSVE  60
LVPNLQSQQQ ITIPSHSDPM RISSSSFLPN ENMNNPFGNV FDFESKGDFV APLIQGNQMD  120
VSAQTSPLPD FPTPTVVGFG PTGLDRLQPL PISRFTSTWL KEFDKSTQKG EEVNYDSNWN  180
NIGANHFNAN NNSNNINNND NDNNIGGIED LKGKKKEIPA KSLMAERRRR KKLSDRLYML  240
RSIVPKITKM DRASILGDAI DYMKELLQRI NDLHSELESS SLGSTFPPST TFHTMIPTTS  300
TLPSMVKEER CPSNVSIPNN QSPKIEVRVR EGKSFSIHMY CPQRPGVLLS TMRALDSLGL  360
EVQQAVINSF NGFTLDVFKA EQCKEGHDVL PEQIKAVLLD TLSFHGMM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1213231KKKEIPAKSLMAERRRRKK
2225232ERRRRKKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004501478.10.0PREDICTED: transcription factor ICE1-like
TrEMBLA0A072V0Y63e-98A0A072V0Y6_MEDTR; BHLH transcriptional factor
TrEMBLW9R8S94e-98W9R8S9_9R
STRINGPOPTR_0015s11650.12e-96(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12860.12e-86bHLH family protein